GCC Code Coverage Report

Directory: Bembel/src/
File: Bembel/src/Geometry/GeometryIO.hpp
Date: 2024-03-19 14:38:05
Exec Total Coverage
Lines: 131 133 98.5%
Functions: 4 4 100.0%
Branches: 52 64 81.2%
Line Branch Exec Source
1 // This file is part of Bembel, the higher order C++ boundary element library.
2 //
3 // Copyright (C) 2024 see <http://www.bembel.eu>
4 //
5 // It was written as part of a cooperation of J. Doelz, H. Harbrecht, S. Kurz,
6 // M. Multerer, S. Schoeps, and F. Wolf at Technische Universitaet Darmstadt,
7 // Universitaet Basel, and Universita della Svizzera italiana, Lugano. This
8 // source code is subject to the GNU General Public License version 3 and
9 // provided WITHOUT ANY WARRANTY, see <http://www.bembel.eu> for further
10 // information.
11
12 #ifndef BEMBEL_SRC_GEOMETRY_GEOMETRYIO_HPP_
13 #define BEMBEL_SRC_GEOMETRY_GEOMETRYIO_HPP_
14
15 namespace Bembel {
16
17 /**
18 * \ingroup Geometry
19 * \brief loads geometry from file with GEOPDE-format. Note that the direction
20 * of the normals must be consistent
21 *
22 * \param file_name path/filename pointing to the geometry file
23 * \return std::vector of NURBS::Patch describing geometry
24 */
25 26 inline std::vector<Patch> LoadGeometryFileDAT(
26 const std::string &file_name) noexcept {
27 26 std::vector<Bembel::Patch> out;
28 26 std::stringstream iss;
29 26 std::string word;
30 26 std::string row;
31 int infoInt[5];
32 26 std::ifstream file;
33 26 file.open(file_name);
34
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 26 if (!file) {
35 ✗ std::cerr << "File " << file_name << " doesn't exist!";
36 ✗ exit(1);
37 }
38 // first 4 rows are irrelevant
39
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 156 for (int i = 0; i < 5; i++) {
40 130 getline(file, row);
41 }
42 // main information
43 26 iss.str(row);
44
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 156 for (int i = 0; i < 5; i++) {
45 130 iss >> word;
46
47 130 infoInt[i] = stoi(word);
48 }
49 // main loop - patches
50
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 114 for (int patchNr = 1; patchNr <= infoInt[2]; patchNr++) {
51 88 Bembel::Patch tempPatch;
52 88 std::vector<double> tempknt1;
53 88 std::vector<double> tempknt2;
54 88 std::vector<int> info; // p and ncp / 0,1-p 2,3-ncp
55 88 std::vector<Eigen::MatrixXd> tmp;
56
57 88 getline(file, row); // file_name
58
59 88 getline(file, row);
60 88 iss.str(row);
61
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 264 while (iss >> word) {
62 176 info.push_back(stoi(word));
63 }
64 88 getline(file, row);
65
66 88 word = "";
67 88 iss.clear();
68 88 iss.str(row);
69
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 264 while (iss >> word) {
70 176 info.push_back(stoi(word));
71 }
72
73 88 word = "";
74 88 iss.clear();
75
76 // In textfiles are only 2 knotVectors and 4 Matrices
77
78 88 getline(file, row);
79 88 iss.str(row);
80
81 // first knotVector
82
83
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 717 for (int k = 0; k < info[0] + info[2] + 1; k++) {
84 629 iss >> word;
85 629 tempknt1.push_back(atof(word.c_str()));
86 }
87 88 iss.clear();
88 88 getline(file, row);
89 88 iss.str(row);
90 88 word = "";
91 // second knotVector
92
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 719 for (int k = 0; k < info[1] + info[3] + 1; k++) {
93 631 iss >> word;
94 631 tempknt2.push_back(atof(word.c_str()));
95 }
96 88 iss.clear();
97 // 4 Matrices
98 88 int N = info[2];
99 88 int M = info[3];
100
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 440 for (int k = 0; k < 4; k++) {
101 Eigen::Matrix<double, -1, -1> tempMatrix(
102 352 M, N); // == Eigen::MatrixXd tempMatrix(M,N);
103 352 getline(file, row);
104 352 iss.str(row);
105
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 1616 for (int i = 0; i < M; i++)
106
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 6576 for (int j = 0; j < N; j++) {
107 5312 iss >> word;
108
109 5312 tempMatrix(i, j) = atof(word.c_str());
110 }
111
112 352 tmp.push_back(tempMatrix);
113 352 iss.clear();
114 352 }
115 // Important
116 88 tempPatch.init_Patch(tmp, tempknt1, tempknt2);
117 88 out.push_back(tempPatch);
118 88 }
119
120 26 file.close();
121 26 return out;
122 26 }
123
124 /**
125 * \ingroup Gemetry
126 * \brief method to generate textfile for the geometry
127 * \param file_name name of new textfile
128 * \param number_of_patches overall number of patches
129 **/
130 1 inline void MakeFile(const std::string &file_name,
131 int number_of_patches) noexcept {
132 1 std::ofstream file;
133 1 file.open(file_name);
134 file << "# nurbs mesh v.2.1"
135 1 << "\r\n";
136 1 file << "# " << file_name << "\r\n";
137 file << "# Generated by BEMBEL, see www.bembel.eu"
138 1 << "\r\n";
139 file << "#"
140 1 << "\r\n";
141 1 file << "2 3 " << number_of_patches << " 0 0 "
142 1 << "\r\n";
143 1 file.close();
144 1 }
145 /**
146 * \ingroup Gemetry
147 * \brief method to write Patch information into textfile
148 * \param knt1 knotVector1
149 * \param knt2 knotVector2
150 * \param xyzw Vector with x,y,z,w Matices
151 * \param file_name filename
152 * \param current_patch_number current patch number
153 **/
154 2 void WritePatch(const std::string &file_name, int current_patch_number,
155 const std::vector<Eigen::MatrixXd> &xyzw,
156 const std::vector<double> &knt1,
157 const std::vector<double> &knt2) noexcept {
158 2 std::ofstream file(file_name, std::ios::app);
159 2 int N = xyzw[0].cols(); // ncp
160 2 int M = xyzw[0].rows(); // ncp
161 2 int p1 = knt1.size() - N - 1;
162 2 int p2 = knt2.size() - M - 1;
163 2 file << "PATCH " << current_patch_number << " \r\n";
164 2 file << p1 << " " << p2 << " \r\n";
165 2 file << N << " " << M << " \r\n";
166 // knotVectors
167
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 20 for (unsigned int i = 0; i < knt1.size() - 1; i++) {
168 18 file << std::fixed << std::setprecision(15) << knt1[i] << " ";
169 }
170 2 file << std::fixed << std::setprecision(15) << knt1[knt1.size() - 1]
171 2 << " \r\n";
172
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 22 for (unsigned int i = 0; i < knt2.size() - 1; i++) {
173 20 file << std::fixed << std::setprecision(15) << knt2[i] << " ";
174 }
175 2 file << std::fixed << std::setprecision(15) << knt2[knt2.size() - 1]
176 2 << " \r\n";
177
178 // Matrices
179
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 10 for (unsigned int n = 0; n < xyzw.size(); n++) {
180
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 52 for (int i = 0; i < M; i++)
181
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 264 for (int j = 0; j < N; j++) {
182 220 file << std::fixed << std::setprecision(15) << xyzw[n](i, j);
183
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 220 if (N * i + j == M * N - 1) {
184 8 file << " \r\n";
185 8 continue;
186 }
187 212 file << " ";
188 }
189 }
190
191 2 file.close();
192 2 }
193
194 /**
195 * \ingroup Geometry
196 * \brief exports a geometry from Bembel to a .dat file.
197 *
198 * Limitation: This functions assumes a p-open knot vector without internal
199 * knots.
200 *
201 * \param Geometry std::vector of NURBS::Patch describing geometry
202 * \param file_name path/filename to be written to
203 */
204 1 void WriteDATFile(const std::vector<Patch> &Geometry,
205 const std::string &file_name) {
206 1 const int number_of_patches = Geometry.size();
207 1 MakeFile(file_name, number_of_patches);
208
209 1 int patch_count = 0;
210
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 3 for (auto &patch : Geometry) {
211
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 2 assert(patch.unique_knots_x_.size() == 2 &&
212 "I assume 0 and 1 as unique knots!");
213
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 2 assert(patch.unique_knots_y_.size() == 2 &&
214 "I assume 0 and 1 as unique knots!");
215
216 2 const int polynomial_degree_x = patch.polynomial_degree_x_;
217 2 const int polynomial_degree_y = patch.polynomial_degree_y_;
218
219
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 2 std::vector<double> knt_x(2 * polynomial_degree_x, 1.0);
220
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 2 std::vector<double> knt_y(2 * polynomial_degree_y, 1.0);
221
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 12 for (auto i = 0; i < polynomial_degree_x; ++i) knt_x[i] = 0.0;
222
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 13 for (auto i = 0; i < polynomial_degree_y; ++i) knt_y[i] = 0.0;
223
224 2 const int number_of_points_x = knt_x.size() - polynomial_degree_x;
225 2 const int number_of_points_y = knt_y.size() - polynomial_degree_y;
226
227 std::vector<Eigen::MatrixXd> data(
228
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 4 4, Eigen::MatrixXd::Zero(number_of_points_y, number_of_points_x));
229
230 2 const int matrix_size = number_of_points_x * number_of_points_y;
231
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 57 for (auto i = 0; i < matrix_size; ++i) {
232 55 const int rowIndex = i % number_of_points_y;
233 55 const int colIndex = i / number_of_points_y;
234
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 55 data[0](rowIndex, colIndex) = patch.data_[4 * i];
235
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 55 data[1](rowIndex, colIndex) = patch.data_[4 * i + 1];
236
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 55 data[2](rowIndex, colIndex) = patch.data_[4 * i + 2];
237
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 55 data[3](rowIndex, colIndex) = patch.data_[4 * i + 3];
238 }
239
240 2 WritePatch(file_name, patch_count, data, knt_x, knt_y);
241 2 ++patch_count;
242 2 }
243
244 1 return;
245 }
246
247 } // namespace Bembel
248 #endif // BEMBEL_SRC_GEOMETRY_GEOMETRYIO_HPP_
249